PEER-REVIEWED ARTICLES

I. STEM CELL ASSAYS, IMMUNOHISTOCHEMISTRY, BIOSENSORS, ONCOLOGY & BIOMEDICAL/BIOLOGICAL LAB-ON-A-CHIP SYSTEMS

Hamed Shadpour, Jon Zawistowski, Annadele Herman, Klaus Hahn and Nancy L. Allbritton, “Patterning micropallet surfaces for cell selection based on high-resolution measurements of fluorescence biosensors”, Analytica Chimica Acta, 696 (2011) 101-107.

Hamed Shadpour and Nancy L. Allbritton, “In-situ roughening of polymeric microstructures”, ACS Applied Materials and Interfaces, 2 (2010) 1086-1093.

Hamed Shadpour, Christopher E. Sims and Nancy L. Allbritton, “Enrichment and expansion of cells using antibody-coated micropallet arrays”, Cytometry A, 75 (2009) 609-618.

Hamed Shadpour, Christopher E. Sims, Randy J. Thresher and Nancy L. Allbritton, “Sorting and expansion of murine embryonic stem cell colonies using micropallet arrays”, Cytometry A, 75 (2009) 121-129, Special Issue, Invited.

Yuli Wang, Georgina To’a Salazar, Jeng-Hao Pai, Hamed Shadpour, Christopher Sims and Nancy L. Allbritton, “Micropallet arrays with poly(ethylene glycol) walls”, Lab-on-a-Chip 8 (2008) 734-740.

Hamed Shadpour, Jared Snider, Adrienne Cox, Sha Chang, Nancy L. Allbritton, et al. “Microbeam irradiation of tumor cells on micropallet arrays”, 2011,

II. SEPARATIONS, PROTEIN ANALYSIS & MICRO/NANOFLUIDICS

Hamed Shadpour and John K. Osiri, “Toward point-of-care microchip profiling of proteins,” Bioanalysis, 2 (2010) 1745-1754, Special Issue/Invited Review, (recommended by the Editorial Board as Best Articles of the Year), also served as the Corresponding Author.

John Osiri, Hamed Shadpour and Steven A Soper, “Ultra-fast two-dimensional microchip electrophoresis using SDS µ-CGE and microemulsion electrokinetic chromatography for protein profiling”, Analytical and Bioanalytical Chemistry, 398 (2010), 489-498.

John Osiri, Hamed Shadpour, Sunjung Park, Brandy Snowden, Zhi Chen and Steven A Soper, “Generating high peak capacity 2-dimensional maps of complex proteomes using poly(methyl methacrylate) microchip electrophoresis”, Electrophoresis, 29 (2008), 4984-4992, Cover Article.

Annie Obubuafo, Subramanian Balamurugan, Hamed Shadpour, David Spivak and Steve Soper, “Poly(methyl methacrylate) microchip affinity capillary gel electrophoresis of aptamer-protein complexes for the analysis of thrombin in plasma”, Electrophoresis 29 (2008), 3436-3445, Special Issue, Invited.

Hamed Shadpour, Mateusz L. Hupert, Changgeng Liu, Donald Patterson, Michelle Galloway, Wieslaw Stryjewski, Jost Goettert and Steven A Soper, “Multichannel microchip electrophoresis device fabricated in polycarbonate with an integrated contact conductivity sensor array”, Analytical Chemistry, 79 (2007) 870-878, Reported as one of Most Accessed Articles.

Hamed Shadpour and Steven A. Soper, “Two-dimensional electrophoretic separation of proteins using poly(methyl methacrylate) microchip”, Analytical Chemistry, 78 (2006) 3519-3527, Hot Article, Featured in: Analytical Chemistry’s A-Pages, June 1, 2006, p.3489, and Journal of Proteome Research, 5(7), 2006, p.1521.

Hamed Shadpour, Harrison Musyimi, Jifeng Chen and Steven A. Soper, “Physiochemical properties of various polymer substrates and their effects on microchip electrophoresis performance”, Journal of Chromatography A, 1111 (2006) 238-251, Special Issue, Invited.

III. GENOMICS, PCR, LDR, SEQUENCING & MICROCHIP BIOANALYTICAL SYSTEMS

Mateusz Hupert, Jason Guy, Shown Llopis, Hamed Shadpour, Sudeer Rahni, Dimitris Nikitopoulos and Steven Soper, “Evaluation of micromilled metal mold masters for the replication of microchip electrophoresis devices”, Microfluidics and Nanofluidics, 3 (2007) 1-11.

Hong Wang, Jifeng Chen, Li Zhu, Hamed Shadpour, Mateusz L. Hupert and Steven A. Soper, “A continues flow thermal cycler microchip for DNA cycle sequencing”, Analytical Chemistry, 78 (2006) 6223-6231.

Jifeng Chen, Musundi Wabuyele, Hengwu Chen, Donald Patterson, Mateusz Hupert, Down Patterson, Hamed Shadpour, Dimitris Nikitopoulos and Steven A. Soper, “Electrokinetically-synchronized polymerase chain reaction microchip fabricated in polycarbonate”, Analytical Chemistry, 77 (2005) 658-666.

IV. DESIGN OF EXPERIMENTS (DOE), OPTIMIZATION, CHEMOMETRICS & OTHERS

Hamed Shadpour, Jae-Kuk Kim and Jifeng Chen, “Orthogonal array design for minimizing loss of vitamin B9 in bread”, Nutrition and Food Science, 37 (2007) 105-114, also served as the Corresponding Author.

Hamed Shadpour, Mohammad Edrissi and Mohammad A. Zanjanchi, “Preparation and characterization of CoxMnmCrnNikFe3-(x+m+n+k)O4 ferrites and optimization of their structural and magnetic properties by Taguchi experimental design”, Journal of Materials Science: Materials in Electronics, 13 (2002) 139-148.

PATENTS & INVENTIONS

Hamed Shadpour, Sean Ford, et al. “Devices and methods for monitoring and controlling temperature in a microfluidic environment ”, U.S. Patent 9945738, 2018.

Hamed Shadpour, Steven A. Soper, et al. “Polymeric nanopillars and nanotubes: their manufacture and uses”, U.S. Patent 9718676, 2017.

Hamed Shadpour, Nancy L. Allbritton, et al. “Systems and methods for isolating cells in cell colonies in culture ”, U.S. Patent and Trademark Office, PCT Int. Appl., WO 2010-068743.

BOOKS AND BOOK CHAPTERS

John K. Osiri, Hamed Shadpour, Magorzata A. Witek and Steven A. Soper, “Integrated multifunctional microfluidics for automated proteome analyses,” Topics in Current Chemistry, 2011, Invited.

Modular microfluidic systems, Mateusz Hupert, Hamed Shadpour, Steven A. Soper, et al. CAMD Annual Book, Editor: Lee Ann Broussard, The Center for Advanced Microstructures and Devices, Baton Rouge, USA, 2005.

Microfluidic platforms for genetic-based analysis, Li Zhu, Hamed Shadpour, Steven A. Soper, et al. CAMD Annual Book, Editor: Lee Ann Broussard, The Center for Advanced Microstructures and Devices, Baton Rouge, USA, 2005.

Development of high-throughput microfluidic devices for detection of low-abundant DNA point mutations, Steven A. Soper, Hamed Shadpour, et al. CAMD Annual Book, Editor: Lee Ann Broussard, The Center for Advanced Microstructures and Devices, Baton Rouge, USA, 2004.

Development of microsystems for genome and protein analyses, Steven A. Soper, Hamed Shadpour, et al. CAMD Annual Book, Editor: Lee Ann Broussard, The Center for Advanced Microstructures and Devices, Baton Rouge, USA, 2003.

DISSERTATION AND THESIS

Two-dimensional and high-throughput electrophoretic separation of proteins using polymeric microchips, Doctoral Dissertation, Louisiana State University, USA, 2006.

Preparation and optimization of ferrite nanoparticles for magnetic recording applications, M.S. Thesis, Amirkabir University of Technology, Iran, 2000.

Application of homogeneous organometallic catalysts for carbonylation and hydroformylation processes, B.S. Independent Project, University of Guilan, Iran, 1997.

PROCEEDING PAPERS AND INTERNATIONAL/NATIONAL CONFERENCE PRESENTATIONS

A lab-on-a-chip FRET biosensor for pharmaceutical applications, Hamed Shadpour, Nancy L. Allbritton, et al. Proceeding of the 37th Annual Meeting of the Federation of Analytical Chemistry and Spectroscopy Societies (FACSS), Raleigh, NC, October 2010.

A microbeam radiation therapy of cells on microchips, Hamed Shadpour, Nancy L. Allbritton, et al. Proceeding of the 37th Annual Meeting of the Federation of Analytical Chemistry and Spectroscopy Societies (FACSS), Raleigh, NC, October 2010.

Use of arrays of releasable microstrucutres for selection of single cells and colonies, Christopher Sims, Hamed Shadpour, et al. Biophysical Journal, 98 (2010) 195a.

A lab-on-a-chip approach for separation and expansion of stem cells and colonies, Hamed Shadpour, Nancy L. Allbritton, et al. 238th Annual Meeting of the American Chemical Society (ACS), Washington, DC, August 2009.

Antibody affinity-based high-throughput separation of cells on micropallets, Hamed Shadpour, Nancy L. Allbritton, et al. Pittsburg Annual Conference (PITTCON), Chicago, IL, March 2009.

Separating the one from the many using the micropallet arrays, Nancy L. Allbritton, Hamed Shadpour, ,et al. Pittsburg Annual Conference (PITTCON), Chicago, IL, March 2009.

Sorting and expansion of murine ES cell colonies using micropallet arrays, Hamed Shadpour, Nancy L. Allbritton, et al. The American Society for Cell Biology (ASCB) Annual Meeting, San Francisco, CA, December 2008.

Enrichment and expansion of cells using antibody-coated micropallet arrays, Hamed Shadpour, Nancy L. Allbritton, et al. The American Society for Cell Biology (ASCB) Annual Meeting, San Francisco, CA, December 2008.

Micropallet arrays for cell analysis, Hamed Shadpour, Nancy L. Allbritton, et al. Gordon Research Conference (GRC), Smithfield, RI, July 2008 (Invited Speaker).

Selection and sorting of primary cells using micropallet arrays, Hamed Shadpour, Nancy L. Allbritton, et al. Pittsburg Annual Conference (PITTCON), New Orleans, LA, March 2008.

Covalent and dynamic coating of PMMA microchips for electrophoresis of ssDNA primers and proteins, John K. Osiri, Hamed Shadpour, Steven A. Soper, et al. Pittsburg Annual Conference (PITTCON), Chicago, IL, February 2007.

The use of microfluidic devices for comprehensive multidimensional electrophoresis of fetal calf serum, Brandy Snowden, Hamed Shadpour, Steven A. Soper, et al. 232th Annual Meeting of the American Chemical Society (ACS), Chicago, IL, February 2007.

Integrated microfluidic system for proteomics using mixed-scale structures and MALDI-TOF-MS, Harrison Musymi, Hamed Shadpour, Kermit K. Murray, et al. 10th Conference of µ-TAS, Japan, 2006, p.1570-1572.

Integrated microfluidic system for the processing of membrane proteins isolated from stem cells, Magorzata A. Witek, Hamed Shadpour, Steven A. Soper, et al. 10th Conference of µ-TAS, Japan, 2006, p.1456-1458.

Miniaturized protein analysis system, John K. Osiri, Hamed Shadpour, Steven A. Soper, et al. NOBCChE Midwest Regional Conference, Ann Arbor, MI, October 2006.

Microfluidic device for comprehensive multi-dimensional electrophoresis of fetal calf serum, Brandy Snowden, Hamed Shadpour, Steven A. Soper, et al. Annual Biomedical Research Conference for Minority Students (ABRCMS), Anaheim, CA, November 2006.

Integrated multidimensional microfluidic system for protein analyses, Hamed Shadpour, Steven A. Soper, et al. 62th ACS Southwest Regional Meeting, Houston, TX, October 2006.

A proteomics chip for MALDI mass spectrometry, Kermit K. Murray, Hamed Shadpour, et al. Proceeding of the 33th Annual Meeting of the Federation of Analytical Chemistry and Spectroscopy Societies (FACSS), Lake Buena Vista, FL, September 2006.

MALDI proteomics chip, Harrison Musymi, Hamed Shadpour, Kermit K. Murray, et al. 54th ASMS Conference on Mass Spectrometry, Seattle, WA, May 2006.

Accelerating proteomics discovery with rapid high efficiency two-dimensional electrophoresis using disposable microchips, Hamed Shadpour, Harrison Musymi, Steven A. Soper, et al. 33rd Annual Conference of NOBCChE, Los Angeles, CA, April 2006 (Invited Speaker).

Comprehensive on-chip two-dimensional electrophoresis of proteins using photopolymerized gel and microemulsions, Hamed Shadpour and Steven A. Soper, 230th Annual Meeting of the American Chemical Society (ACS), Atlanta, GA, March 2006.

Integrated proteomic analysis on a microfluidic device coupled to matrix assisted laser deposition / ionization mass spectrometry, Harrison Musymi, Hamed Shadpour, Kermit K. Murray, et al. 230th Annual Meeting of the American Chemical Society (ACS), Atlanta, GA, March 2006.

Integrated microfluidic device coupled to matrix assisted laser deposition / ionization mass spectrometry, Harrison Musymi, Hamed Shadpour, Kermit K. Murray, et al. Pittsburg Annual Conference (PITTCON), Orlando, FL, March 2006.

Multichannel polycarbonate microchip electrophoresis device with conductivity sensors, Hamed Shadpour, Steven A. Soper, et al. Gordon Graduate Research Seminar (GRC-GRS): Bioanalytical Sensors, Ventura, CA, February 2006 (Invited Speaker).

New chemometric approach in protein crystallography, Hamed Shadpour, 229th Annual Meeting of the American Chemical Society (ACS), Washington, DC, August 2005.

High-throughput array electrophoresis chips fabricated in polymers, Steven A. Soper, Hamed Shadpour, et al. 18th International Symposium on Micro-Scale Bio-Separations (MSB), New Orleans, LA, February 2005, p.161 (also served as Conference Organizer).

A novel approach to high efficiency multi-dimensional electrophoresis of SDS-denatured, dye-labeled proteins in a disposable poly(methyl methacrylate)-based microdevice, Hamed Shadpour and Steven A. Soper , Pittsburg Annual Conference (PITTCON), Orlando, FL, February 2005, p.150.

A novel microfluidic device for multi-dimensional electrophoretic separation of native proteins in a few minutes, Hamed Shadpour and Steven A. Soper, NOBCChE Southwest Regional Conference, New Orleans, LA, November 2004, p.22 (Invited Speaker).

High efficiency separation of proteins in poly(methyl methacrylate)-based microchips: application of a new optimization technique, Hamed Shadpour and Steven A. Soper, Proceeding of the 31th Annual Meeting of the Federation of Analytical Chemistry and Spectroscopy Societies (FACSS), Portland, OR, October 2004.

Multidimensional microchip electrophoresis of proteins, Hamed Shadpour and Steven A. Soper, Book of Review of the Annual Meeting of the American Institute of Chemical Engineers (AIChE), Austin, TX, November 2004 (Invited Speaker).

High characterization of regional chemical concentrations of the mammalian vitreous humor, Frank Ohene, Hamed Shadpour, Steven A. Soper, et al. Annual Biomedical Research Conference for Minority Students (ABRCMS), Dallas, TX, November 2004.

Investigation and minimizing loss of vitamin B9 in bread during the heating process by a novel matrix-assisted optimization method, Hamed Shadpour, et al. 228th Annual Meeting of The American Chemical Society (ACS), Philadelphia, PA, August 2004.

Electroosmotic flow control and simulation in poly(methyl methacrylate) and polycarbonate PCR microchips, Jifeng Chen, Hamed Shadpour and Steven A. Soper, 227th Annual Meeting of The American Chemical Society (ACS), Anaheim, CA, March 2004, p.120.

Two-dimensional separation of proteins in a PMMA microchip, Hamed Shadpour and Steven A. Soper, 227th Annual Meeting of the American Chemical Society (ACS), Anaheim, CA, March 2004, p.119.

Using Taguchi plan for optimization of effective factors in the reaction for producing cobalt ferrites, H. Shadpour, M. Edrissi, et al. Proceeding of the Chemistry Congress of Sharif University of Technology, Tehran, Iran, February 2001, p.295.

Preparation of cobalt ferrite in aqueous suspension and optimization of the process by Taguchi design, H. Shadpour, M. Edrissi, et al. Proceeding of the Louis Pasteur University of France Chemistry Congress, Tehran, Iran, November 2000, p.53.

Optimization of factors involved in ferrite preparation by Taguchi design, H. Shadpour, M. Edrissi, et al. Proceeding of the Crystallography Congress of Iran, Tehran, Iran, November 1999, p.101.

INVITED LOCAL CONFERENCE, MEETINGS AND WORKSHOP PRESENTATIONS

Micropallet array sorting of cells, Hamed Shadpour, Nancy L. Allbritton, et al. The Annual Meeting of Carolina Center of Cancer Nanotechnology Excellence, Chapel Hill, NC, May 2009.

Micropallet arrays with nanostructures, Hamed Shadpour and Nancy L. Allbritton, Chapel Hill Analytical and Nanofabrication Laboratory (CHANL) Symposium, Chapel Hill, NC, January 2009.

Micropallet arrays for separation of cells and colonies, Wei Xu, Hamed Shadpour, Nancy L. Allbritton, et al. Chapel Hill Analytical and Nanofabrication Laboratory (CHANL) Symposium, Chapel Hill, NC, January 2009.

Design of a micropallet array with liquid walls for highly sensitive fluorescence imaging, Doug Ornoff, Hamed Shadpour, Klaus Hahn, Nancy L. Allbritton, et al. The Annual UNC MD-PhD Students’ Presentation, Chapel Hill, NC, November 2008.

Laser-based release of micropallets from arrays for single cell separation, Philip Gash, Hamed Shadpour, Nancy L. Allbritton, et al. The Annual UNC Lasers and Microscopy Meeting, Chapel Hill, NC, July 2008.

Micropallet technology for cell analysis, Hamed Shadpour, Nancy L. Allbritton, et al. The Annual Meeting of Carolina Center of Cancer Nanotechnology Excellence, Chapel Hill, NC, May 2008.

High-efficiency multi-dimensional separation of Fetal Calf serum proteins using microfluidic polymeric devices, Brandy Snowden, Hamed Shadpour, Steven A. Soper, et al. The Annual Meeting of Louisiana Biomedical Research Network (LBRN), Baton Rouge, LA, August 2006.

Integrated poly(methyl methacrylate) microfluidic system for automated and high-throughput proteomics, Hamed Shadpour, Steven A. Soper, et al. Center for Bio-Modular Multi-Scale Systems Annual Colloquium, Baton Rouge, LA, July 2006.

Detection modes in microfluidic devices, Hamed Shadpour, Center for Bio-Modular Multi-Scale Systems Seminar Series, Baton Rouge, LA, May 2006 (Invited Speaker).

Microchip high-throughput analysis of non-labeled biomolecules, Hamed Shadpour, Steven A. Soper, et al. The Annual Meeting of the Center for Advanced Microstructures and Devices (CAMD), Baton Rouge, LA, April 2006.

Multi-channel electrophoresis of biomolecules with electrochemical detection using microfluidic array devices, Hamed Shadpour and Steven A. Soper, The 8th Annual Symposium of NOBCChE, Baton Rouge, LA, April 2006.

Multi-channel polycarbonate microchip with conductivity sensors, Hamed Shadpour and Steven A. Soper, The Annual Clean Room users’ Meeting of the Center for Advanced Microstructures and Devices (CAMD), Baton Rouge, LA, January 2006.

Analysis of bovine vitreous humor using both capillary electrophoresis and microfluidic systems, Kourtney Castille, Hamed Shadpour, Steven A. Soper, et al. The Annual Meeting of Louisiana Biomedical Research Network (LBRN), Baton Rouge, LA, July 2005.

High-throughput microfluidic device for micro-scale bio-separations, Hamed Shadpour, Steven Soper, et al. The 8th Annual Symposium of NOBCChE, Baton Rouge, LA, April 2005.

Multi-channel PC device with integrated conductivity detector for analysis of biological samples, Hamed Shadpour, Steven A. Soper, et al. The Annual Meeting of the Center for Advanced Microstructures and Devices (CAMD), Baton Rouge, LA, April 2005.

Capillary and microdevice electrophoresis separation of proteins, Ambrose, Asha A., Shadpour, Hamed., Soper, Steven A., et al. 79th Annual Meeting of Louisiana Academy of Science, LA, March 2005, p.6.

Capillary and microchip separation of proteins: application of microtechnology in biological science, Asha A. Ambrose, Hamed Shadpour, Steven A. Soper, et al. The Annual Meeting of Louisiana Biomedical Research Network (LBRN), Baton Rouge, LA, July 2004.

MEKC and SDS-PAGE separation of proteins in PMMA microchips, Hamed Shadpour and Steven A. Soper, The Annual Meeting of the Center for Advanced Microstructures and Devices (CAMD), Baton Rouge, LA, p.21, April 2004.

Study, optimization and combination of micellar electrokinetic chromatography (MEKC) with sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) to achieve well resolved proteins in PMMA microchip, Hamed Shadpour and Steven A. Soper, The 7th Annual Symposium of NOBCChE, Baton Rouge, LA, April 2004.

Two-dimensional separation of proteins in microchips, Hamed Shadpour and Steven A. Soper, The 6th Annual Symposium of NOBCChE, Baton Rouge, LA, April 2003, p.5.

 

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